This paper reports the results of 3-D tomographic modelling of crustal structure in the Trans European Suture Zone region (TESZ) of Poland, eastern Germany and Lithuania. The data are the product of a large-scale seismic experiment POLONAISE'97, which was carried out in 1997. This experiment was designed to provide some 3-D coverage. The TESZ forms the boundary between the Precambrian crustal terranes of the East European Craton (EEC) and the younger Phanerozoic terranes to the southwest. The 3-D results generally confirm the earth models derived by earlier 2-D analyses, but also add some important details as well as a 3-D perspective on the structure. The velocity model obtained shows substantial horizontal variations of crustal structure across the study area. Seismic modelling shows low (<6.1 km/s) velocities suggesting the presence of sedimentary rocks down to a depth of about 20 km in the Polish basin. The shape of the basin in the vicinity of the profile P4 shows significant asymmetry. Three-dimensional modelling also allowed tracing of horizontal irregularities of the basin shape as well as variations of the Moho depth not only along profiles, but also between them. The slice between P2 and P4 profiles shows about 10-km variations of the Moho over a 100-km interval. The crustal thickness varies from about 30 km in SW, beneath the Palaeozoic platform, to about 42 km beneath East European Craton in NE. High seismic velocities of about 6.6 km/s were found in the depth range 2–10 km, which coincides with Kętrzyn anorthosite massif. The results of this 3-D seismic modelling of the POLONAISE'97 data will ultimately be supplemented by inversion of seismic data from previous experiments.